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"Познание начинается с удивления" (Аристотель)
Новое в науке на 2025-07-02

The long-term effects of chemotherapy on normal blood cells

Mutational signature analysis of blood cells isolated from 23 chemotherapy-exposed samples and 9 nonexposed controls characterizes the effects of various drugs on mutational burden, signature exposure and cell types.

2025-07-01

Clonal evolution of hematopoietic stem cells after autologous stem cell transplantation

Analysis of whole-genome sequencing data from hematopoietic stem and progenitor cells taken from patients with myeloma shows how treatment shapes clonal architecture and sheds light on the evolution of treatment-related myeloid neoplasms.

2025-07-01

Cell cycle regulation has shaped replication origins in budding yeast

Licensing of eukaryotic origins of replication with MCM double hexamers (DHs) can occur through distinct pathways. Here, Lim et al. show that in yeast, cell cycle-dependent regulation of DH formation by CDK and origin structure have co-evolved.

2025-06-30

Efficacy of pembrolizumab and vorinostat combination in patients with recurrent and/or metastatic squamous cell carcinomas: a phase 2 basket trial

Borcoman and colleagues present the efficacy and safety results of the phase 2 PEVOsq basket trial investigating the combination of pembrolizumab with the epidrug vorinostat in patients with recurrent and/or metastatic squamous cell carcinoma.

2025-06-30

Differential expression analysis with inmoose, the integrated multi-omic open-source environment in Python

Differential gene expression analysis is a prominent technique for the analysis of biomolecular data to identify genetic features associated with phenotypes. Limma—for microarray data –, and edgeR and DESeq2—for...

2025-06-23

PRCFX-DT: a new graph-based approach for feature selection and classification of genomic sequences

In recent years, viral diseases have exhibited a significant incidence of infections and fatalities. The analysis of viral genomic sequences can be efficacious in evaluating the present and potentially...

2025-06-17

Start & Stop: a PhysiCell and PhysiBoSS 2.0 add-on for interactive simulation control

In computational biology, in silico simulators are vital for exploring and understanding the behavior of complex biological systems. Hybrid multi-level simulators, such as PhysiCell and PhysiBoSS 2.0, integrate...

2025-06-11

SCATrans: semantic cross-attention transformer for drug–drug interaction predication through multimodal biomedical data

Predicting potential drug-drug interactions (DDIs) from biomedical data plays a critical role in drug therapy, drug development, drug regulation, and public health. However, it remains challenging due to the...

2025-06-10

SEQSIM: A novel bioinformatics tool for comparisons of promoter regions—a case study of calcium binding protein spermatid associated 1 (CABS1)

Understanding transcriptional regulation requires an in-depth analysis of promoter regions, which house vital cis-regulatory elements such as core promoters, enhancers, and silencers. Despite the significance...

2025-06-09